Circular RNA screening identifies circMYLK4 as a regulator of fast/slow myofibers in porcine skeletal muscles

Mol Genet Genomics. 2022 Jan;297(1):87-99. doi: 10.1007/s00438-021-01835-5. Epub 2021 Nov 16.

Abstract

The type of myofiber is related to the quality of meat. The slow oxidized myofiber helps to increase the tenderness and juiciness of muscle. Numerous studies have shown that circRNA plays a key role in skeletal muscle development. However, the role of circRNA in porcine skeletal myofiber types is unclear. In this study, we performed high-throughput RNA sequencing to study the differential expression of circRNA in the longissimus dorsi and the soleus muscle. A total of 40,757 circRNAs were identified, of which 181 were significantly different. Interestingly, some circRNAs were involved in metabolism pathways, AMPK, FoxO, and PI3K-Akt signaling pathways. Besides, we focused on a novel circRNA-circMYLK4. By injecting circMYLK4-AAV into piglets, we found that circMYLK4 significantly increased the mRNA and protein levels of the slow muscle marker genes. In summary, our study laid an essential foundation for further research of circRNA in myofiber type conversion and higher meat quality.

Keywords: CircMYLK4; High throughput sequencing; Meat quality; Muscle fiber type; Pig.

MeSH terms

  • Animals
  • Animals, Genetically Modified
  • Cell Differentiation / genetics
  • Gene Expression Profiling
  • High-Throughput Nucleotide Sequencing
  • Male
  • Muscle Development / genetics*
  • Muscle Fibers, Fast-Twitch / physiology
  • Muscle Fibers, Slow-Twitch / physiology
  • Muscle, Skeletal / growth & development*
  • Muscle, Skeletal / physiology
  • RNA, Circular / analysis
  • RNA, Circular / genetics
  • RNA, Circular / physiology*
  • Swine* / genetics
  • Swine* / growth & development

Substances

  • RNA, Circular