Free energies of membrane stalk formation from a lipidomics perspective

Nat Commun. 2021 Nov 15;12(1):6594. doi: 10.1038/s41467-021-26924-2.

Abstract

Many biological membranes are asymmetric and exhibit complex lipid composition, comprising hundreds of distinct chemical species. Identifying the biological function and advantage of this complexity is a central goal of membrane biology. Here, we study how membrane complexity controls the energetics of the first steps of membrane fusions, that is, the formation of a stalk. We first present a computationally efficient method for simulating thermodynamically reversible pathways of stalk formation at coarse-grained resolution. The method reveals that the inner leaflet of a typical plasma membrane is far more fusogenic than the outer leaflet, which is likely an adaptation to evolutionary pressure. To rationalize these findings by the distinct lipid compositions, we computed ~200 free energies of stalk formation in membranes with different lipid head groups, tail lengths, tail unsaturations, and sterol content. In summary, the simulations reveal a drastic influence of the lipid composition on stalk formation and a comprehensive fusogenicity map of many biologically relevant lipid classes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biophysics
  • Cell Membrane / chemistry
  • Computational Biology
  • Entropy*
  • Kinetics
  • Lipidomics / methods*
  • Membrane Fusion
  • Membranes / chemistry*
  • Thermodynamics