Spatiotemporal expression of long noncoding RNA Moshe modulates heart cell lineage commitment

RNA Biol. 2021 Nov 12;18(sup2):640-654. doi: 10.1080/15476286.2021.1976549. Epub 2021 Nov 10.

Abstract

The roles of long non-coding RNA (LncRNA) have been highlighted in various development processes including congenital heart defects (CHD). Here, we characterized the molecular function of LncRNA, Moshe (1010001N08ik-203), one of the Gata6 antisense transcripts located upstream of Gata6, which is involved in both heart development and the most common type of congenital heart defect, atrial septal defect (ASD). During mouse embryonic development, Moshe was first detected during the cardiac mesoderm stage (E8.5 to E9.5) where Gata6 is expressed and continues to increase at the atrioventricular septum (E12.5), which is involved in ASD. Functionally, the knock-down of Moshe during cardiogenesis caused significant repression of Nkx2.5 in cardiac progenitor stages and resulted in the increase in major SHF lineage genes, such as cardiac transcriptional factors (Isl1, Hand2, Tbx2), endothelial-specific genes (Cd31, Flk1, Tie1, vWF), a smooth muscle actin (a-Sma) and sinoatrial node-specific genes (Shox2, Tbx18). Chromatin Isolation by RNA Purification showed Moshe activates Nkx2.5 gene expression via direct binding to its promoter region. Of note, Moshe was conserved across species, including human, pig and mouse. Altogether, this study suggests that Moshe is a heart-enriched lncRNA that controls a sophisticated network of cardiogenesis by repressing genes in SHF via Nkx2.5 during cardiac development and may play an important role in ASD.

Keywords: Gata6 antisense transcript; Long non-coding RNA; atrial septal defect; heart development; second heart field.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Differentiation / genetics*
  • Cell Line
  • Cell Lineage / genetics*
  • Enhancer Elements, Genetic
  • GATA6 Transcription Factor / genetics
  • Gene Expression Profiling
  • Gene Expression Regulation, Developmental
  • Gene Knockdown Techniques
  • Humans
  • Mesoderm / embryology
  • Mesoderm / metabolism
  • Mice
  • Myoblasts, Cardiac / cytology
  • Myoblasts, Cardiac / metabolism
  • Myocytes, Cardiac / cytology
  • Myocytes, Cardiac / metabolism*
  • Organogenesis / genetics
  • Promoter Regions, Genetic
  • RNA Interference
  • RNA, Antisense
  • RNA, Long Noncoding / genetics*

Substances

  • GATA6 Transcription Factor
  • RNA, Antisense
  • RNA, Long Noncoding

Grants and funding

This research was supported by the Bio & Medical Technology Development Program of the National Research Foundation (NRF) funded by the Ministry of Science and ICT National Research Foundation of Korea #2016M3A9B6026771, #2014M3A9D5A01073598 and #2019R1F1A1061923.