High-resolution epitope mapping by AllerScan reveals relationships between IgE and IgG repertoires during peanut oral immunotherapy

Cell Rep Med. 2021 Oct 19;2(10):100410. doi: 10.1016/j.xcrm.2021.100410.

Abstract

Peanut allergy can result in life-threatening reactions and is a major public health concern. Oral immunotherapy (OIT) induces desensitization to food allergens through administration of increasing amounts of allergen. To dissect peanut-specific immunoglobulin E (IgE) and IgG responses in subjects undergoing OIT, we have developed AllerScan, a method that leverages phage-display and next-generation sequencing to identify the epitope targets of peanut-specific antibodies. We observe a striking diversification and boosting of the peanut-specific IgG repertoire after OIT and a reduction in pre-existing IgE levels against individual epitopes. High-resolution epitope mapping reveals shared recognition of public epitopes in Ara h 1, 2, 3, and 7. In individual subjects, OIT-induced IgG specificities overlap extensively with IgE and exhibit strikingly similar antibody footprints, suggesting related clonal lineages or convergent evolution of peanut-specific IgE and IgG B cells. Individual differences in epitope recognition identified via AllerScan could inform safer and more effective personalized immunotherapy.

Trial registration: ClinicalTrials.gov NCT01781637.

Keywords: IgE; allergen immunotherapy; antibody; antibody repertoire; epitope mapping; food allergy; high-throughput sequencing; oral immunotherapy; peanut allergy; phage display.

Publication types

  • Multicenter Study
  • Randomized Controlled Trial
  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • 2S Albumins, Plant / administration & dosage
  • 2S Albumins, Plant / chemistry
  • Antigens, Plant / administration & dosage
  • Antigens, Plant / chemistry
  • Arachis / chemistry
  • Arachis / immunology
  • B-Lymphocytes / immunology
  • B-Lymphocytes / pathology
  • Case-Control Studies
  • Desensitization, Immunologic / methods*
  • Epitope Mapping / methods*
  • Epitopes / chemistry*
  • Epitopes / immunology
  • High-Throughput Nucleotide Sequencing
  • High-Throughput Screening Assays
  • Humans
  • Immunoglobulin E / blood*
  • Immunoglobulin G / blood*
  • Membrane Proteins / administration & dosage
  • Membrane Proteins / chemistry
  • Omalizumab / therapeutic use*
  • Peanut Hypersensitivity / genetics
  • Peanut Hypersensitivity / immunology
  • Peanut Hypersensitivity / pathology
  • Peanut Hypersensitivity / therapy*
  • Peptide Library
  • Plant Proteins / administration & dosage
  • Plant Proteins / chemistry
  • Precision Medicine
  • Seed Storage Proteins

Substances

  • 2S Albumins, Plant
  • Antigens, Plant
  • Ara h 1 protein, Arachis hypogaea
  • Ara h 2 allergen, Arachis hypogaea
  • Epitopes
  • Immunoglobulin G
  • Membrane Proteins
  • Peptide Library
  • Plant Proteins
  • Seed Storage Proteins
  • allergen Ara h3
  • Omalizumab
  • Immunoglobulin E

Associated data

  • ClinicalTrials.gov/NCT01781637