Microproteins: a 3D protein structure prediction analysis

J Biomol Struct Dyn. 2022;40(24):13738-13746. doi: 10.1080/07391102.2021.1993343. Epub 2021 Oct 27.

Abstract

Microproteins are a novel and expanding group of small proteins encoded by less than 100-150 codons that are translated from small open reading frames (smORFs). It has been shown that smORFs and their corresponding microproteins make up a sizable fraction of the genome and proteome, but very little information on microproteins' structural features exists in the literature. In this paper, we present the results of analyzing the predicted structures of 44 microproteins. The results show that this set of microproteins have a different amino acid composition profiles, similar structural characteristics and fewer small-molecule ligand binding sites than regular proteins.Communicated by Ramaswamy H. Sarma.

Keywords: Gene ontology; ligand binding sites; microproteins; protein structure; protein structure prediction.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Micropeptides
  • Open Reading Frames / genetics
  • Proteins* / genetics

Substances

  • Proteins