Photocycle dynamics of the Archaerhodopsin 3 based fluorescent voltage sensor Archon2

J Photochem Photobiol B. 2021 Dec:225:112331. doi: 10.1016/j.jphotobiol.2021.112331. Epub 2021 Oct 9.

Abstract

The retinal photocycle dynamics of the fluorescent voltage sensor Archon2 in pH 8 Tris buffer was studied. Archon2 is a mutant of Archaerhodopsin 3 (Arch) from Halorubrum sodomense obtained by a robotic multidimensional directed evolution approach (Archon2 = Arch T56P-P60S-T80P-D95H-T99S-T116I-F161V-T183I-L197I-A225C). The samples were photo-excited to the first absorption band of the protonated retinal Schiff base (PRSB) Ret_586 (absorption maximum at λmax = 586 nm, excitation wavelengths λexc = 590 nm and 632.8 nm). The photocycle dynamics were studied by recording absorption spectra during light exposure and after light exposure. Ret_586 photoisomerized to Ret_535 (main component) and Ret_485 (minor component). Ret_535 backward photoisomerized to Ret_586 in light-adapted state (named Ret_586la) and partly deprotonated to neutral retinal Schiff base (RSB) Ret_372 in light adapted state (named Ret_372la, same isomer form as Ret_535). After excitation light switch-off Ret_372la recovered to Ret_372 in dark-adapted state (Ret_372da) which slowly re-protonated to Ret_535, and Ret_535 slowly isomerized back to Ret_586 in dark-adapted state (Ret_586da). Photocycle schemes and reaction coordinate diagrams are developed and photocycle parameters are determined.

Keywords: Absorption spectroscopic studies; Archaerhodopsin 3; Archon2; Genetically encoded voltage sensor (GEVI); Photocycle dynamics; Photoisomerization; Thermal activated isomerization, Thermal activated deprotonation; Thermal activated re-protonation.

MeSH terms

  • Archaeal Proteins / metabolism*
  • Fluorescence
  • Fluorescence Resonance Energy Transfer
  • Fluorescent Dyes / chemistry*
  • Halorubrum / metabolism*
  • Isomerism
  • Photochemical Processes
  • Protons
  • Retinaldehyde / metabolism
  • Schiff Bases / chemistry

Substances

  • Archaeal Proteins
  • Fluorescent Dyes
  • Protons
  • Schiff Bases
  • archaerhodopsin protein, Archaea
  • Retinaldehyde