m6A Modified Short RNA Fragments Inhibit Cytoplasmic TLS/FUS Aggregation Induced by Hyperosmotic Stress

Int J Mol Sci. 2021 Oct 12;22(20):11014. doi: 10.3390/ijms222011014.

Abstract

Translocated in LipoSarcoma/Fused in Sarcoma (TLS/FUS) is a nuclear RNA binding protein whose mutations cause amyotrophic lateral sclerosis. TLS/FUS undergoes LLPS and forms membraneless particles with other proteins and nucleic acids. Interaction with RNA alters conformation of TLS/FUS, which affects binding with proteins, but the effect of m6A RNA modification on the TLS/FUS-RNA interaction remains elusive. Here, we investigated the binding specificity of TLS/FUS to m6A RNA fragments by RNA pull down assay, and elucidated that both wild type and ALS-related TLS/FUS mutants strongly bound to m6A modified RNAs. TLS/FUS formed cytoplasmic foci by treating hyperosmotic stress, but the cells transfected with m6A-modified RNAs had a smaller number of foci. Moreover, m6A-modified RNA transfection resulted in the cells obtaining higher resistance to the stress. In summary, we propose TLS/FUS as a novel candidate of m6A recognition protein, and m6A-modified RNA fragments diffuse cytoplasmic TLS/FUS foci and thereby enhance cell viability.

Keywords: LLPS; RNA m6A modification; TLS/FUS; lncRNA; pncRNA-D.

MeSH terms

  • Adenosine / analogs & derivatives*
  • Adenosine / chemistry
  • Cell Line
  • Cell Survival / drug effects
  • Cytoplasm / metabolism
  • Genetic Loci
  • Humans
  • Liquid-Liquid Extraction
  • Mutagenesis, Site-Directed
  • Protein Aggregates / drug effects
  • Protein Binding
  • RNA / chemistry
  • RNA / metabolism*
  • RNA / pharmacology
  • RNA, Long Noncoding / chemistry
  • RNA-Binding Protein FUS / chemistry
  • RNA-Binding Protein FUS / genetics
  • RNA-Binding Protein FUS / metabolism*
  • Sorbitol / pharmacology

Substances

  • Protein Aggregates
  • RNA, Long Noncoding
  • RNA-Binding Protein FUS
  • Sorbitol
  • RNA
  • N-methyladenosine
  • Adenosine