Cyclic Dipeptides: The Biological and Structural Landscape with Special Focus on the Anti-Cancer Proline-Based Scaffold

Biomolecules. 2021 Oct 14;11(10):1515. doi: 10.3390/biom11101515.

Abstract

Cyclic dipeptides, also know as diketopiperazines (DKP), the simplest cyclic forms of peptides widespread in nature, are unsurpassed in their structural and bio-functional diversity. DKPs, especially those containing proline, due to their unique features such as, inter alia, extra-rigid conformation, high resistance to enzyme degradation, increased cell permeability, and expandable ability to bind a diverse of targets with better affinity, have emerged in the last years as biologically pre-validated platforms for the drug discovery. Recent advances have revealed their enormous potential in the development of next-generation theranostics, smart delivery systems, and biomaterials. Here, we present an updated review on the biological and structural profile of these appealing biomolecules, with a particular emphasis on those with anticancer properties, since cancers are the main cause of death all over the world. Additionally, we provide a consideration on supramolecular structuring and synthons, based on the proline-based DKP privileged scaffold, for inspiration in the design of compound libraries in search of ideal ligands, innovative self-assembled nanomaterials, and bio-functional architectures.

Keywords: cyclic dipeptides; diketopiperazines; drug discovery; privileged scaffold; proline-based DKPs; supramolecular structuring.

Publication types

  • Review

MeSH terms

  • Diketopiperazines / chemistry*
  • Diketopiperazines / therapeutic use
  • Dipeptides / chemistry*
  • Dipeptides / genetics
  • Dipeptides / therapeutic use
  • Drug Discovery
  • Humans
  • Neoplasms / drug therapy*
  • Neoplasms / genetics
  • Peptides, Cyclic / chemistry
  • Peptides, Cyclic / genetics
  • Peptides, Cyclic / therapeutic use
  • Proline / chemistry*
  • Proline / genetics
  • Proline / therapeutic use

Substances

  • Diketopiperazines
  • Dipeptides
  • Peptides, Cyclic
  • Proline