An Integrative Pan-Cancer Analysis of the Oncogenic Role of COPB2 in Human Tumors

Biomed Res Int. 2021 Oct 12:2021:7405322. doi: 10.1155/2021/7405322. eCollection 2021.

Abstract

Several studies have suggested that coatomer protein complex subunit beta 2 (COPB2) may act as an oncogene in various cancer types. However, no systematic pan-cancer analysis has been performed to date. Therefore, the present study analyzed the potential oncogenic role of COPB2 using TCGA (The Cancer Genome Atlas) and GEO (Gene Expression Omnibus) datasets. The majority of the cancer types overexpressed the COPB2 protein, and its expression significantly correlated with tumor prognosis. In certain tumors, such as those found in breast and ovarian tissues, phosphorylated S859 exhibited high expression. It was found that mutations of the COPB2 protein in kidney and endometrial cancers exhibited a significant impact on patient prognosis. It is interesting to note that COPB2 expression correlated with the number of cancer-associated fibroblasts in certain tumors, such as cervical and endocervical cancers and colon adenocarcinomas. In addition, COPB2 was involved in the transport of substances and correlated with chemotherapy sensitivity. This is considered the first pan-tumor study, which provided a relatively comprehensive understanding of the mechanism by which COPB2 promotes cancer growth.

MeSH terms

  • Coatomer Protein / genetics*
  • Coatomer Protein / metabolism
  • Computational Biology
  • Databases, Genetic
  • Humans
  • Molecular Targeted Therapy / methods*
  • Neoplasms / genetics*
  • Neoplasms / metabolism
  • Neoplasms / pathology
  • Prognosis
  • Survival Rate

Substances

  • COPB2 protein, human
  • Coatomer Protein