Circular Antisense Oligonucleotides for Specific RNase-H-Mediated microRNA Inhibition with Reduced Off-Target Effects and Nonspecific Immunostimulation

J Med Chem. 2021 Nov 11;64(21):16046-16055. doi: 10.1021/acs.jmedchem.1c01421. Epub 2021 Oct 21.

Abstract

Antisense microRNA oligodeoxynucleotides (AMOs) are powerful tools to regulate microRNA functions. Unfortunately, severe off-target effects are sometimes observed. Due to the special topological and enzymatic properties of circular oligodeoxynucleotides (c-ODNs), we rationally designed and developed circular AMOs, which effectively inhibited microRNA functions with high target specificity and low off-target effects. Binding and enzymatic assays indicated that small circular AMOs could selectively bind to and further digest the target mature miR 21, which suggested that the topological properties of circular c-ODNs significantly decreased their off-target effects as microRNA inhibitors. Compared with their linear corresponding phosphorothioated AMOs, circular phosphorothioated AMOs could more effectively reduce the amount of carcinogenic miR 21 and miR 222 and upregulate the expression levels of downstream antitumor proteins of PTEN and PDCD4. In addition, c-PS-antimiRs induced much less nonspecific immunostimulatory effects compared with their linear partner PS-ODNs, further indicating the advantages of circular ODNs in nonspecific immunostimulation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Immunization*
  • MicroRNAs / antagonists & inhibitors*
  • Oligonucleotides, Antisense / pharmacology*
  • Ribonuclease H / metabolism*

Substances

  • MicroRNAs
  • Oligonucleotides, Antisense
  • Ribonuclease H