A comparative study at bioprocess and metabolite levels of superhost strain Streptomyces coelicolor M1152 and its derivative M1581 heterologously expressing chloramphenicol biosynthetic gene cluster

Biotechnol Bioeng. 2022 Jan;119(1):145-161. doi: 10.1002/bit.27958. Epub 2021 Oct 20.

Abstract

Microbial superhost strains should provide an ideal platform for the efficient homologous or heterologous phenotypic expression of biosynthetic gene clusters (BGCs) of new and novel bioactive molecules. Our aim in the current study was to perform a comparative study at the bioprocess and metabolite levels of the previously designed superhost strain Streptomyces coelicolor M1152 and its derivative strain S. coelicolor M1581 heterologously expressing chloramphenicol BGC. Parent strain M1152 was characterized by a higher specific growth rate, specific CO2 evolution rate, and a higher specific l-glutamate consumption rate as compared with M1581. Intracellular primary central metabolites (nucleoside/sugar phosphates, amino acids, organic acids, and CoAs) were quantified using four targeted LC-MS/MS-based methods. The metabolite pathways in the nonantibiotic producing S. coelicolor host strain were flooded with carbon from both carbon sources, whereas in antibiotic-producing strain, the carbon of l-glutamate seems to be draining out through excreting synthesized antibiotic. The 13 C-isotope-labeling experiments revealed the bidirectionality in the glycolytic pathway and reversibility in the non-oxidative part of PPP even with continuous uptake of d-glucose. The change in the primary metabolites due to the insertion of BGC disclosed a clear linkage between the primary and secondary metabolites.

Keywords: bioreactors; central carbon metabolites; metabolomics; physiology; tandem mass spectrometry; targeted metabolite profiling.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Anti-Bacterial Agents / metabolism*
  • Bioreactors / microbiology*
  • Carbon / metabolism*
  • Chloramphenicol / metabolism*
  • Drug Resistance, Bacterial
  • Metabolic Networks and Pathways / genetics
  • Metabolome
  • Metabolomics
  • Streptomyces coelicolor* / genetics
  • Streptomyces coelicolor* / metabolism
  • Tandem Mass Spectrometry

Substances

  • Anti-Bacterial Agents
  • Chloramphenicol
  • Carbon