ATAD2 controls chromatin-bound HIRA turnover

Life Sci Alliance. 2021 Sep 27;4(12):e202101151. doi: 10.26508/lsa.202101151. Print 2021 Dec.

Abstract

Taking advantage of the evolutionary conserved nature of ATAD2, we report here a series of parallel functional studies in human, mouse, and Schizosaccharomyces pombe to investigate ATAD2's conserved functions. In S. pombe, the deletion of ATAD2 ortholog, abo1, leads to a dramatic decrease in cell growth, with the appearance of suppressor clones recovering normal growth. The identification of the corresponding suppressor mutations revealed a strong genetic interaction between Abo1 and the histone chaperone HIRA. In human cancer cell lines and in mouse embryonic stem cells, we observed that the KO of ATAD2 leads to an accumulation of HIRA. A ChIP-seq mapping of nucleosome-bound HIRA and FACT in Atad2 KO mouse ES cells demonstrated that both chaperones are trapped on nucleosomes at the transcription start sites of active genes, resulting in the abnormal presence of a chaperone-bound nucleosome on the TSS-associated nucleosome-free regions. Overall, these data highlight an important layer of regulation of chromatin dynamics ensuring the turnover of histone-bound chaperones.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • ATPases Associated with Diverse Cellular Activities / genetics
  • ATPases Associated with Diverse Cellular Activities / metabolism*
  • Animals
  • Cell Cycle Proteins / metabolism*
  • Cell Proliferation / genetics
  • DNA-Binding Proteins / genetics
  • DNA-Binding Proteins / metabolism*
  • Gene Deletion
  • Gene Knockout Techniques
  • Genotype
  • HeLa Cells
  • Hep G2 Cells
  • Histone Chaperones / metabolism*
  • Humans
  • Mice
  • Microorganisms, Genetically-Modified
  • Mouse Embryonic Stem Cells / metabolism*
  • Nucleosomes / metabolism*
  • Schizosaccharomyces / genetics
  • Schizosaccharomyces / metabolism*
  • Schizosaccharomyces pombe Proteins / genetics
  • Schizosaccharomyces pombe Proteins / metabolism*
  • Signal Transduction / genetics*
  • Transcription Factors / metabolism*
  • Transfection

Substances

  • Cell Cycle Proteins
  • DNA-Binding Proteins
  • HIRA protein, human
  • Hira protein, mouse
  • Histone Chaperones
  • Nucleosomes
  • Schizosaccharomyces pombe Proteins
  • Transcription Factors
  • ATAD2 protein, human
  • ATAD2 protein, mouse
  • ATPases Associated with Diverse Cellular Activities