Conservation in the Iron Responsive Element Family

Genes (Basel). 2021 Aug 30;12(9):1365. doi: 10.3390/genes12091365.

Abstract

Iron responsive elements (IREs) are mRNA stem-loop targets for translational control by the two iron regulatory proteins IRP1 and IRP2. They are found in the untranslated regions (UTRs) of genes that code for proteins involved in iron metabolism. There are ten "classic" IRE types that define the conserved secondary and tertiary structure elements necessary for proper IRP binding, and there are 83 published "IRE-like" sequences, most of which depart from the established IRE model. Here are structurally-guided discussions regarding the essential features of an IRE and what is important for IRE family membership.

Keywords: covariance model (CM); iron regulatory protein (IRP); iron-responsive element (IRE); messenger RNA (mRNA); pseudo-triloop (PTL); untranslated region (UTR).

Publication types

  • Review

MeSH terms

  • Animals
  • Humans
  • Iron Regulatory Protein 1 / chemistry
  • Iron Regulatory Protein 1 / metabolism
  • Iron* / metabolism
  • Nucleic Acid Conformation
  • RNA, Messenger / chemistry*
  • Response Elements* / physiology

Substances

  • RNA, Messenger
  • Iron
  • Iron Regulatory Protein 1