Design and Prototyping of Genetically Encoded Arsenic Biosensors Based on Transcriptional Regulator AfArsR

Biomolecules. 2021 Aug 26;11(9):1276. doi: 10.3390/biom11091276.

Abstract

Genetically encoded biosensors based on engineered fluorescent proteins (FPs) are essential tools for monitoring the dynamics of specific ions and molecules in biological systems. Arsenic ion in the +3 oxidation state (As3+) is highly toxic to cells due to its ability to bind to protein thiol groups, leading to inhibition of protein function, disruption of protein-protein interactions, and eventually to cell death. A genetically encoded biosensor for the detection of As3+ could potentially facilitate the investigation of such toxicity both in vitro and in vivo. Here, we designed and developed two prototype genetically encoded arsenic biosensors (GEARs), based on a bacterial As3+ responsive transcriptional factor AfArsR from Acidithiobacillus ferrooxidans. We constructed FRET-based GEAR biosensors by insertion of AfArsR between FP acceptor/donor FRET pairs. We further designed and engineered single FP-based GEAR biosensors by insertion of AfArsR into GFP. These constructs represent prototypes for a new family of biosensors based on the ArsR transcriptional factor scaffold. Further improvements of the GEAR biosensor family could lead to variants with suitable performance for detection of As3+ in various biological and environmental systems.

Keywords: FRET and FP-based arsenic biosensors; arsenic biosensors (GEARs); genetically encoded biosensor.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acidithiobacillus / genetics*
  • Arsenic / metabolism*
  • Bacterial Proteins / genetics*
  • Binding Sites
  • Biosensing Techniques*
  • Cysteine / genetics
  • Fluorescence Resonance Energy Transfer
  • Luminescent Proteins / metabolism
  • Mutation / genetics
  • Principal Component Analysis
  • Transcription Factors / genetics*
  • Transcription Factors / metabolism

Substances

  • Bacterial Proteins
  • Luminescent Proteins
  • Transcription Factors
  • Cysteine
  • Arsenic

Supplementary concepts

  • Acidithiobacillus ferrooxidans