Magnetic hydrogels have found a myriad of applications in bioengineering and soft robotics. As the function of magnetic hydrogels is affected by the distribution of magnetic nanoparticles, it is imperative to propose a strategy for fabricating patterned magnetic hydrogels. However, previous strategies can only achieve very simple distribution by using external magnetic fields to guide the chain-like assembly of nanoparticles. It remains challenging to realize the complex distribution of magnetic nanoparticles in a hydrogel. Here we propose an ion transfer printing strategy to prepare patterned magnetic hydrogels, taking advantage of the ion permeation and nanoparticle precipitation in the hydrogel. The polyacrylamide (PAAm) hydrogel is loaded with Fe2+/Fe3+ ions and covered with a patterned filter paper with OH- ions to generate Fe3O4 nanoparticles locally. The effect of the ion concentration and covering time on the generation of nanoparticles is investigated by using a reaction-diffusion model. Furthermore, the magnetothermal response of the patterned magnetic hydrogels has been characterized to reveal the distribution and thermogenesis of magnetic nanoparticles. We hope that the fabricated magnetic hydrogels with complex patterns can open up new opportunities for applications.