A virus-free cellular model recapitulates several features of severe COVID-19

Sci Rep. 2021 Sep 1;11(1):17473. doi: 10.1038/s41598-021-96875-7.

Abstract

As for all newly-emergent pathogens, SARS-CoV-2 presents with a relative paucity of clinical information and experimental models, a situation hampering both the development of new effective treatments and the prediction of future outbreaks. Here, we find that a simple virus-free model, based on publicly available transcriptional data from human cell lines, is surprisingly able to recapitulate several features of the clinically relevant infections. By segregating cell lines (n = 1305) from the CCLE project on the base of their sole angiotensin-converting enzyme 2 (ACE2) mRNA content, we found that overexpressing cells present with molecular features resembling those of at-risk patients, including senescence, impairment of antibody production, epigenetic regulation, DNA repair and apoptosis, neutralization of the interferon response, proneness to an overemphasized innate immune activity, hyperinflammation by IL-1, diabetes, hypercoagulation and hypogonadism. Likewise, several pathways were found to display a differential expression between sexes, with males being in the least advantageous position, thus suggesting that the model could reproduce even the sex-related disparities observed in the clinical outcome of patients with COVID-19. Overall, besides validating a new disease model, our data suggest that, in patients with severe COVID-19, a baseline ground could be already present and, as a consequence, the viral infection might simply exacerbate a variety of latent (or inherent) pre-existing conditions, representing therefore a tipping point at which they become clinically significant.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Angiotensin-Converting Enzyme 2 / genetics*
  • COVID-19 / genetics*
  • COVID-19 / immunology
  • Cell Line
  • Databases, Genetic
  • Female
  • Gene Expression Profiling / methods*
  • Humans
  • Immunity, Innate
  • Male
  • Models, Biological
  • Models, Theoretical
  • Sex Characteristics
  • Up-Regulation*

Substances

  • ACE2 protein, human
  • Angiotensin-Converting Enzyme 2