Multiple analysis of root exudates and microbiome in rice (Oryza sativa) under low P conditions

Arch Microbiol. 2021 Nov;203(9):5599-5611. doi: 10.1007/s00203-021-02539-5. Epub 2021 Aug 28.

Abstract

Plants release various metabolites from roots and root exudates contribute to differences in stress tolerance among plant species. Plant and soil microbes have complex interactions that are affected by biotic and abiotic factors. The purpose of this study was to examine the differences in metabolites in root exudates of rice (Oryza sativa) cultivars and their correlation with bacterial populations in the rhizosphere. Two rice cultivars (O. sativa cv. Akamai and O. sativa cv. Koshihikari) were grown in soils fertilized with 0 g P kg-1 (- P) or 4.8 g P kg-1 (+ P). Root exudates and root-attached soil were collected at 13 and 20 days after transplanting (DAT) and their metabolites and bacterial community structure were determined. The exudation of proline, serine, threonine, valine and 4-coumarate were increased under low P conditions in both cultivars. There was a positive correlation between the concentration of pantothenate in root exudates and the representation of members of the genera Clostridium and Sporosarcina, which were negatively correlated with root dry weight. Gracilibacter, Opitutus, Pelotomaculum, Phenylobacterium and Oxobacter were positively correlated with root dry weight and presence of allantoin, 2-aminobtyrate and GlcNac. This study provides new information about the response of plants and rhizosphere soil bacteria to low P conditions.

Keywords: Bacterial community Oryza sativa; P deficiency; Root exudate.

MeSH terms

  • Exudates and Transudates
  • Microbiota*
  • Oryza*
  • Plant Roots
  • Rhizosphere
  • Soil

Substances

  • Soil