Computational Insight on the Interaction of Common Blood Proteins with Gold Nanoparticles

Int J Mol Sci. 2021 Aug 13;22(16):8722. doi: 10.3390/ijms22168722.

Abstract

Protein interactions with engineered gold nanoparticles (AuNPs) and the consequent formation of the protein corona are very relevant and poorly understood biological phenomena. The nanoparticle coverage affects protein binding modalities, and the adsorbed protein sites influence interactions with other macromolecules and cells. Here, we studied four common blood proteins, i.e., hemoglobin, serum albumin, α1-antiproteinase, and complement C3, interacting with AuNPs covered by hydrophobic 11-mercapto-1-undecanesulfonate (MUS). We use Molecular Dynamics and the Martini coarse-grained model to gain quantitative insight into the kinetics of the interaction, the physico-chemical characteristics of the binding site, and the nanoparticle adsorption capacity. Results show that proteins bind to MUS-capped AuNPs through strong hydrophobic interactions and that they adapt to the AuNP surfaces to maximize the contact surface, but no dramatic change in the secondary structure of the proteins is observed. We suggest a new method to calculate the maximum adsorption capacity of capped AuNPs based on the effective surface covered by each protein, which better represents the realistic behavior of these systems.

Keywords: albumin; coarse-grained model; computer simulation; hemoglobin; molecular dynamics; nanoparticle; protein-corona.

MeSH terms

  • Binding Sites
  • Blood Proteins / chemistry*
  • Blood Proteins / metabolism*
  • Computational Biology / methods*
  • Gold / chemistry
  • Gold / metabolism*
  • Humans
  • Hydrophobic and Hydrophilic Interactions
  • Metal Nanoparticles
  • Models, Molecular
  • Molecular Dynamics Simulation
  • Protein Binding
  • Protein Structure, Secondary

Substances

  • Blood Proteins
  • Gold