Presence, Mode of Action, and Application of Pathway Specific Transcription Factors in Aspergillus Biosynthetic Gene Clusters

Int J Mol Sci. 2021 Aug 13;22(16):8709. doi: 10.3390/ijms22168709.

Abstract

Fungal secondary metabolites are renowned toxins as well as valuable sources of antibiotics, cholesterol-lowering drugs, and immunosuppressants; hence, great efforts were levied to understand how these compounds are genetically regulated. The genes encoding for the enzymes required for synthesizing secondary metabolites are arranged in biosynthetic gene clusters (BGCs). Often, BGCs contain a pathway specific transcription factor (PSTF), a valuable tool in shutting down or turning up production of the BGC product. In this review, we present an in-depth view of PSTFs by examining over 40 characterized BGCs in the well-studied fungal species Aspergillus nidulans and Aspergillus fumigatus. Herein, we find BGC size is a predictor for presence of PSTFs, consider the number and the relative location of PSTF in regard to the cluster(s) regulated, discuss the function and the evolution of PSTFs, and present application strategies for pathway specific activation of cryptic BGCs.

Keywords: Aspergillus; evolution; pathway specific transcription factor; regulation; transcription factor.

Publication types

  • Review

MeSH terms

  • Aspergillus nidulans / genetics
  • Aspergillus nidulans / metabolism*
  • Biosynthetic Pathways
  • Evolution, Molecular
  • Fungal Proteins / genetics
  • Fungal Proteins / metabolism
  • Gene Expression Regulation, Fungal
  • Multigene Family
  • Secondary Metabolism
  • Transcription Factors / genetics*
  • Transcription Factors / metabolism*

Substances

  • Fungal Proteins
  • Transcription Factors