Coleus blumei viroid 7: a novel viroid resulting from genome recombination between Coleus blumei viroids 1 and 5

Arch Virol. 2021 Nov;166(11):3157-3163. doi: 10.1007/s00705-021-05201-z. Epub 2021 Aug 15.

Abstract

The genus Coleviroid, family Pospiviroidae, comprises six known viroids, all infecting Plectranthus scutellarioides (Coleus blumei; coleus). In 2017, a novel viroid-like RNA sequence that shares ca. 65% identity with Coleus blumei viroid 1 (CbVd-1) was identified in a coleus cultivar infected by multiple coleviroids. Further sequence and secondary structure analyses are consistent with the discovery of a seventh viroid in the genus Coleviroid: tentatively named "Coleus blumei viroid 7" (CbVd-7). The viroid appears to be the product of a natural recombination event between CbVd-1 and Coleus blumei viroid 5. We prove CbVd-7 to be infectious and in turn demonstrate the ability of all known coleviroid left- and right-arm segments to recombine. With a length of 234 nucleotides, this is the smallest viroid described to date.

MeSH terms

  • Genome, Viral
  • Phylogeny
  • Plectranthus / virology*
  • Reassortant Viruses / genetics*
  • Recombination, Genetic*
  • Viroids / genetics*
  • Viroids / isolation & purification
  • Viroids / pathogenicity