Estimation of the lipophilicity of purine-2,6-dione-based TRPA1 antagonists and PDE4/7 inhibitors with analgesic activity

Bioorg Med Chem Lett. 2021 Oct 1:49:128318. doi: 10.1016/j.bmcl.2021.128318. Epub 2021 Aug 12.

Abstract

Lipophilicity is one of the principal QSAR parameters which influences among others the pharmacodynamics and pharmacokinetic properties of a drug candidates. In this paper, the lipophilicity of 14 amide derivatives of 1,3-dimethyl-2,6-dioxopurin-7-yl-alkylcarboxylic acids as multifunctional TRPA1 channel antagonists and phosphodiesterase 4/7 inhibitors with analgesic activity were investigated, using reversed-phase thin-layer chromatography method. It was observed that the retention behavior of the analyzed compounds was dependent on their structural features i.e. an aliphatic linker length, a kind of substituent at 8 position of purine-2,6-dione scaffold as well as on a substitution in a phenyl group. The experimental parameters (RM0) were compared with computationally calculated partition coefficient values by Principal Component Analysis (PCA). To verify the influence of lipophilic parameter of the investigated compounds on their biological activity the Kruskal-Wallis test was performed. The lowest lipophilicity was observed for the compounds with weak PDE4/7 inhibitory potency. The differences between the lipophilicity of potent inhibitors and inactive compounds were statistically significant. It was found that the presence of more lipophilic propoxy- or butoxy- substituents as well as the elongation of the aliphatic chain to propylene one between the purine-2,6-dione core and amide group were preferable for desired multifunctional activity.

Keywords: Chromatography; Lipophilicity; Multifunctional ligands; Principal Component Analysis; Purine-2,6-dione.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Analgesics / chemistry*
  • Benzeneacetamides / chemistry*
  • Cyclic Nucleotide Phosphodiesterases, Type 7 / antagonists & inhibitors
  • Hydrophobic and Hydrophilic Interactions
  • Molecular Structure
  • Phenylbutyrates / chemistry
  • Phosphodiesterase 4 Inhibitors / chemistry*
  • Principal Component Analysis
  • Quantitative Structure-Activity Relationship
  • TRPA1 Cation Channel / antagonists & inhibitors*
  • Xanthines / chemistry*

Substances

  • Analgesics
  • Benzeneacetamides
  • Phenylbutyrates
  • Phosphodiesterase 4 Inhibitors
  • TRPA1 Cation Channel
  • Xanthines
  • Cyclic Nucleotide Phosphodiesterases, Type 7