The complete chloroplast genome sequence of wild Japanese pepper Tubocapsicum anomalum Makino (Solanaceae)

Rui-Hong Wang; Min-Min Chen; Yun-Zhe Wu; Rui-Rui Wang; Xian-Fei Xiao; Zhe-Chen Qi; Xiao-Ling Yan

doi:10.1080/23802359.2021.1950063

The complete chloroplast genome sequence of wild Japanese pepper Tubocapsicum anomalum Makino (Solanaceae)

Mitochondrial DNA B Resour. 2021 Jul 15;6(8):2322-2323. doi: 10.1080/23802359.2021.1950063. eCollection 2021.

Authors

Rui-Hong Wang¹, Min-Min Chen¹, Yun-Zhe Wu¹, Rui-Rui Wang¹, Xian-Fei Xiao¹, Zhe-Chen Qi^{1

2}, Xiao-Ling Yan³

Affiliations

¹ Zhejiang Province Key Laboratory of Plant Secondary Metabolism and Regulation, College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, China.
² Shaoxing Academy of Biomedicine of Zhejiang Sci-Tech University, Hangzhou, China.
³ Shanghai Chenshan Plant Science Research Centre, Chinese Academy of Sciences, Shanghai Chenshan Botanical Garden, Shanghai, China.

Abstract

As an important medicinal herb, no complete organelle molecular data has been reported for Tubocapsicum anomalum. In this study, the first complete chloroplast genome of Tubocapsicum anomalum Makino was sequenced and assembled. The genome is 155,802 bp in length and contained 124 encoded genes in total, including 75 protein-coding genes, 10 ribosomal RNA genes, and 39 transfer RNA genes. The phylogenomic analysis showed that Tubocapsicum anomalum was closely related to Withania somnifera according the current sampling extent.

Keywords: Tubocapsicum anomalum; chloroplast genome; phylogeny.

Grants and funding

This work was supported by the Natural Science Foundation of Zhejiang Province [LY21C030008], the Chenshan Special Foundations from Shanghai Municipal Administration of Forestation and City Appearances [G212405], the Fundamental Research Funds of Zhejiang Sci-Tech University [2020Q031], the Open Fund of Shaoxing Academy of Biomedicine of Zhejiang Sci-Tech University [SXAB202020], and the Open Fund of Shanghai Key Laboratory of Plant Functional Genomics and Resources [PFGR202002, PFGR202104].