Comprehensive Consensus Analysis of SARS-CoV-2 Drug Repurposing Campaigns

J Chem Inf Model. 2021 Aug 23;61(8):3771-3788. doi: 10.1021/acs.jcim.1c00384. Epub 2021 Jul 27.

Abstract

The current COVID-19 pandemic has elicited extensive repurposing efforts (both small and large scale) to rapidly identify COVID-19 treatments among approved drugs. Herein, we provide a literature review of large-scale SARS-CoV-2 antiviral drug repurposing efforts and highlight a marked lack of consistent potency reporting. This variability indicates the importance of standardizing best practices-including the use of relevant cell lines, viral isolates, and validated screening protocols. We further surveyed available biochemical and virtual screening studies against SARS-CoV-2 targets (Spike, ACE2, RdRp, PLpro, and Mpro) and discuss repurposing candidates exhibiting consistent activity across diverse, triaging assays and predictive models. Moreover, we examine repurposed drugs and their efficacy against COVID-19 and the outcomes of representative repurposed drugs in clinical trials. Finally, we propose a drug repurposing pipeline to encourage the implementation of standard methods to fast-track the discovery of candidates and to ensure reproducible results.

Keywords: COVID-19; SARS-CoV-2; chemical libraries; docking; drug repurposing; high-throughput screening; main protease; spike protein; virtual screening.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antiviral Agents / pharmacology
  • COVID-19*
  • Consensus
  • Drug Repositioning*
  • Humans
  • Molecular Docking Simulation
  • Pandemics
  • SARS-CoV-2

Substances

  • Antiviral Agents