A fast and automated separation and quantification method for bromine speciation analyzing bromide and 5-bromo-2'-deoxyuridine in enzymatically digested DNA samples via ion chromatography-inductively coupled plasma-mass spectrometry

J Chromatogr A. 2021 Aug 30:1652:462370. doi: 10.1016/j.chroma.2021.462370. Epub 2021 Jun 29.

Abstract

A fast and automated separation and quantification method for bromide and the artificial nucleoside 5-bromo-2'-deoxyuridine (5-BrdU) via hyphenation of ion exchange chromatography (IC) and inductively coupled plasma-mass spectrometry (ICP-MS) is presented. The analysis of these two species is relevant to monitor the transfer of electrons along metal-mediated DNA base pairs. Charge transfer in DNA is of high interest for the implementation in nanotechnological applications like molecular wires. 5-BrdU as part of the DNA sequence releases bromide upon one electron reduction after efficient electron transfer along the DNA. The concentrations of 5-BrdU and bromide in enzymatically digested DNA samples can therefore be used as a marker for the efficiency of electron transfer along the DNA helix. A large number of samples was analyzed using an automated IC system. This platform enables time-efficient external calibration by inline dilution of a stock solution. Due to the fast separation of the two bromine species in less than 90 s, the developed method is suitable for screening applications with a multitude of samples. Despite the isobaric interferences and a low degree of ionization for bromine detection via ICP-MS the method has a limit of detection (LOD) of 30 ng/L which is approximately an order of magnitude lower than a comparable method using reversed phase high performance liquid chromatography (RP-HPLC) and ICP-MS.

Keywords: Automation; Bromine speciation; Charge transfer; DNA; ICP-MS; Ion exchange chromatography.

MeSH terms

  • Bromides* / analysis
  • Bromine* / chemistry
  • Bromodeoxyuridine* / analysis
  • Chemistry Techniques, Analytical* / methods
  • Chromatography, Ion Exchange
  • DNA / chemistry
  • Mass Spectrometry*

Substances

  • Bromides
  • DNA
  • Bromodeoxyuridine
  • Bromine