All-Atom Simulations Uncover the Molecular Terms of the NKCC1 Transport Mechanism

J Chem Inf Model. 2021 Jul 26;61(7):3649-3658. doi: 10.1021/acs.jcim.1c00551. Epub 2021 Jul 2.

Abstract

The secondary-active Na-K-Cl cotransporter 1 (NKCC1), member of the cation-chloride cotransporter (CCC) family, ensures the electroneutral movement of Cl-, Na+, and K+ ions across cellular membranes. NKCC1 regulates Cl- homeostasis and cell volume, handling a pivotal role in transepithelial water transport and neuronal excitability. Aberrant NKCC1 transport is hence implicated in a variety of human diseases (hypertension, renal disorders, neuropathies, and cancer). Building on the newly resolved NKCC1 cryo-EM structure, all-atom enhanced sampling simulations unprecedentedly unlock the mechanism of NKCC1-mediated ion transport, assessing the order and the molecular basis of its interdependent ion translocation. Our outcomes strikingly advance the understanding of the physiological mechanism of CCCs and disclose a key role of CCC-conserved asparagine residues, whose side-chain promiscuity ensures the transport of both negatively and positively charged ions along the same translocation route. This study sets a conceptual basis to devise NKCC-selective inhibitors to treat diseases linked to Cl- dishomeostasis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biological Transport
  • Humans
  • Ion Transport
  • K Cl- Cotransporters
  • Sodium / metabolism
  • Solute Carrier Family 12, Member 2 / metabolism*
  • Symporters*

Substances

  • SLC12A2 protein, human
  • Solute Carrier Family 12, Member 2
  • Symporters
  • Sodium