Acidic pH irreversibly activates the signaling enzyme SARM1

FEBS J. 2021 Dec;288(23):6783-6794. doi: 10.1111/febs.16104. Epub 2021 Jul 13.

Abstract

SARM1, an executioner in axon degeneration, is an autoinhibitory NAD-consuming enzyme, composed of multiple domains. NMN and its analogs, CZ-48 and VMN, are the only known activators, which can release the inhibitory ARM domain from the enzymatic TIR domain. Here, we document that acid can also activate SARM1, even more efficiently than NMN, possibly via the protonation of the negative residues. Systematic mutagenesis revealed that a single mutation, E689Q in TIR, led to the constitutive activation of SARM1. It forms a salt bridge with R216 in the neighboring ARM, maintaining the autoinhibitory structure. Using this 'acid activation' protocol, mutation K597E was found to inhibit activation, while H685A eliminated SARM1 catalytic activity, revealing two distinct inhibitory mechanisms. The protocol has also been applied to differentiate two classes of chemical inhibitors. NAD, dHNN, disulfiram, CHAPS, and TRX-100 mainly inhibited the activation process, while nicotinamide and Tweens mainly inhibited SARM1 catalysis. Taken together, we demonstrate a new mechanism for SARM1 activation and decipher two distinct inhibitory mechanisms of SARM1.

Keywords: E689Q; PC6; R216Q; SARM1; acid-induced activation; nicotinamide mononucleotide.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acids / chemistry*
  • Armadillo Domain Proteins / chemistry
  • Armadillo Domain Proteins / genetics*
  • Armadillo Domain Proteins / metabolism
  • Biocatalysis / drug effects
  • Cytoskeletal Proteins / chemistry
  • Cytoskeletal Proteins / genetics*
  • Cytoskeletal Proteins / metabolism
  • Disulfiram / pharmacology
  • Enzyme Activation
  • Enzyme Inhibitors / pharmacology
  • HEK293 Cells
  • Humans
  • Hydrogen-Ion Concentration
  • Kinetics
  • Models, Molecular
  • Mutation*
  • NAD / metabolism
  • Niacinamide / pharmacology
  • Protein Domains

Substances

  • Acids
  • Armadillo Domain Proteins
  • Cytoskeletal Proteins
  • Enzyme Inhibitors
  • SARM1 protein, human
  • NAD
  • Niacinamide
  • Disulfiram

Associated data

  • RefSeq/NM_015077.3