The Antiviral Effect of the Chemical Compounds Targeting DED/EDh Motifs of the Viral Proteins on Lymphocytic Choriomeningitis Virus and SARS-CoV-2

Viruses. 2021 Jun 24;13(7):1220. doi: 10.3390/v13071220.

Abstract

Arenaviruses and coronaviruses include several human pathogenic viruses, such as Lassa virus, Lymphocytic choriomeningitis virus (LCMV), SARS-CoV, MERS-CoV, and SARS-CoV-2. Although these viruses belong to different virus families, they possess a common motif, the DED/EDh motif, known as an exonuclease (ExoN) motif. In this study, proof-of-concept studies, in which the DED/EDh motif in these viral proteins, NP for arenaviruses, and nsp14 for coronaviruses, could be a drug target, were performed. Docking simulation studies between two structurally different chemical compounds, ATA and PV6R, and the DED/EDh motifs in these viral proteins indicated that these compounds target DED/EDh motifs. The concentration which exhibited modest cell toxicity was used with these compounds to treat LCMV and SARS-CoV-2 infections in two different cell lines, A549 and Vero 76 cells. Both ATA and PV6R inhibited the post-entry step of LCMV and SARS-CoV-2 infection. These studies strongly suggest that DED/EDh motifs in these viral proteins could be a drug target to combat two distinct viral families, arenaviruses and coronaviruses.

Keywords: DED/EDh motif; Lymphocytic choriomeningitis virus (LCMV); SARS-CoV-2; antivirals; exonuclease (ExoN) motif.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • A549 Cells
  • Amino Acid Motifs
  • Animals
  • Antiviral Agents / pharmacology*
  • Chlorocebus aethiops
  • Drug Discovery
  • Exoribonucleases / antagonists & inhibitors*
  • Humans
  • Lymphocytic choriomeningitis virus / drug effects*
  • Molecular Docking Simulation
  • SARS-CoV-2 / drug effects*
  • Vero Cells
  • Viral Nonstructural Proteins / antagonists & inhibitors*
  • Viral Proteins / antagonists & inhibitors*
  • Virus Replication / drug effects*

Substances

  • Antiviral Agents
  • Viral Nonstructural Proteins
  • Viral Proteins
  • Exoribonucleases
  • NSP14 protein, SARS-CoV-2