Cellulosimicrobium fucosivorans sp. nov., isolated from San Elijo Lagoon, contains a fucose metabolic pathway linked to carotenoid production

Arch Microbiol. 2021 Sep;203(7):4525-4538. doi: 10.1007/s00203-021-02443-y. Epub 2021 Jun 20.

Abstract

Cellulosimicrobium strain SE3T was isolated from the San Elijo coastal lagoon near San Diego. A whole genome-based phylogenetic comparison shows great heterogeneity within the Cellulosimicrobium genus. Based on average nucleotide identity, whole genome-based comparison, and the presence of a unique L-fucose metabolic pathway, strain SE3T was shown to belong to a novel species within the genus, together with five other strains. The name Cellulosimicrobium fucosivorans sp. nov. is proposed, with strain SE3T as the type strain. The strain encodes a unique alpha-L-fucosidase and the L-fucose metabolic pathway is homologous to the one recently described in Campylobacter jejuni. C. fucosivorans is able to grow on L-fucose, and interestingly, the biosynthesis of the yellow carotenoid is dependent on the presence of L-fucose in the media. The ability to metabolize fucose and the linked production of carotenoids are expected to provide C. fucosivorans with a competitive advantage in the sunny coastal lagoon area.

Keywords: Carotenoid; Cellulosimicrobium; Fucosidase; L-Fucose; Taxonomy; Whole-genome comparison.

MeSH terms

  • Actinobacteria* / classification
  • Actinobacteria* / genetics
  • Actinobacteria* / metabolism
  • California
  • Carotenoids* / metabolism
  • Fatty Acids / analysis
  • Fucose / metabolism
  • Metabolic Networks and Pathways* / genetics
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Seawater / microbiology
  • Species Specificity

Substances

  • Fatty Acids
  • RNA, Ribosomal, 16S
  • Fucose
  • Carotenoids