Proteomic analysis identifies the E3 ubiquitin ligase Pdzrn3 as a regulatory target of Wnt5a-Ror signaling

Proc Natl Acad Sci U S A. 2021 Jun 22;118(25):e2104944118. doi: 10.1073/pnas.2104944118.

Abstract

Wnt5a-Ror signaling is a conserved pathway that regulates morphogenetic processes during vertebrate development [R. T. Moon et al, Development 119, 97-111 (1993); I. Oishi et al, Genes Cells 8, 645-654 (2003)], but its downstream signaling events remain poorly understood. Through a large-scale proteomic screen in mouse embryonic fibroblasts, we identified the E3 ubiquitin ligase Pdzrn3 as a regulatory target of the Wnt5a-Ror pathway. Upon pathway activation, Pdzrn3 is degraded in a β-catenin-independent, ubiquitin-proteasome system-dependent manner. We developed a flow cytometry-based reporter to monitor Pdzrn3 abundance and delineated a signaling cascade involving Frizzled, Dishevelled, Casein kinase 1, and Glycogen synthase kinase 3 that regulates Pdzrn3 stability. Epistatically, Pdzrn3 is regulated independently of Kif26b, another Wnt5a-Ror effector. Wnt5a-dependent degradation of Pdzrn3 requires phosphorylation of three conserved amino acids within its C-terminal LNX3H domain [M. Flynn, O. Saha, P. Young, BMC Evol. Biol. 11, 235 (2011)], which acts as a bona fide Wnt5a-responsive element. Importantly, this phospho-dependent degradation is essential for Wnt5a-Ror modulation of cell migration. Collectively, this work establishes a Wnt5a-Ror cell morphogenetic cascade involving Pdzrn3 phosphorylation and degradation.

Keywords: Pdzrn3; Ror1; Ror2; Wnt5a.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Movement
  • Mice
  • Phosphorylation
  • Proteasome Endopeptidase Complex / metabolism
  • Protein Domains
  • Proteolysis
  • Proteomics*
  • Receptor Tyrosine Kinase-like Orphan Receptors / metabolism*
  • Reproducibility of Results
  • Ubiquitin / metabolism
  • Ubiquitin-Protein Ligases / metabolism*
  • Wnt Signaling Pathway*
  • Wnt-5a Protein / metabolism*

Substances

  • Ubiquitin
  • Wnt-5a Protein
  • PDZRN3 protein, mouse
  • Ubiquitin-Protein Ligases
  • Receptor Tyrosine Kinase-like Orphan Receptors
  • Proteasome Endopeptidase Complex