Deep learning for tracing esophageal motility function over time

Comput Methods Programs Biomed. 2021 Aug:207:106212. doi: 10.1016/j.cmpb.2021.106212. Epub 2021 Jun 1.

Abstract

Background and objective: Esophageal high-resolution manometry (HRM) is widely performed to evaluate the representation of manometric features in patients for diagnosing normal esophageal motility and motility disorders. Clinicians commonly assess esophageal motility function using a scheme termed the Chicago classification, which is difficult, time-consuming and inefficient with large amounts of data.

Methods: Deep learning is a promising approach for diagnosing disorders and has various attractive advantages. In this study, we effectively trace esophageal motility function with HRM by using a deep learning computational model, namely, EMD-DL, which leverages three-dimensional convolution (Conv3D) and bidirectional convolutional long-short-term-memory (BiConvLSTM) models. More specifically, to fully exploit wet swallowing information, we establish an efficient swallowing representation method by localizing manometric features and swallowing box regressions from HRM. Then, EMD-DL learns how to identify major motility disorders, minor motility disorders and normal motility. To the best of our knowledge, this is the first attempt to use Conv3D and BiConvLSTM to predict esophageal motility function over esophageal HRM.

Results: Test experiments on HRM datasets demonstrated that the overall accuracy of the proposed EMD-DL model is 91.32% with 90.5% sensitivity and 95.87% specificity. By leveraging information across swallowing motor cycles, our model can rapidly recognize esophageal motility function better than a gastroenterologist and lays the foundation for accurately diagnosing esophageal motility disorders in real time.

Conclusions: This approach opens new avenues for detecting and identifying esophageal motility function, thereby facilitating more efficient computer-aided diagnosis in clinical practice.

Keywords: Bidirectional convolutional long short-term memory (BiConvLSTM); Computer-aided diagnosis (CAD); Esophageal motility function (EMD); High-resolution manometry (HRM); Three-dimensional convolution (Conv3D).

MeSH terms

  • Deep Learning*
  • Deglutition
  • Diagnosis, Computer-Assisted
  • Esophageal Motility Disorders* / diagnosis
  • Humans
  • Manometry