Profiling Autoantibody Responses to Devise Novel Diagnostic and Prognostic Markers Using High-Density Protein Microarrays

Methods Mol Biol. 2021:2344:191-208. doi: 10.1007/978-1-0716-1562-1_14.

Abstract

Protein microarrays are a diverse and high-throughput platform for screening biomolecular interactions, autoantigens, and protein expression profiles across tissues, etc. Autoantibodies produced against aberrant protein expression are often observed in malignancies which makes protein microarrays a powerful platform to elucidate biomarkers of translational interest. Early diagnosis of malignancies is an enduring clinical problem that has a direct impact on disease prognosis. Here, we provide an overview of a method employed to screen autoantibodies using patient sera in brain tumors. In case of brain malignancies, early diagnosis is particularly challenging and often requires highly invasive brain biopsies as a confirmatory test. This chapter summarizes the various considerations for applying a serum-based autoantibody biomarker discovery pipeline that could provide a minimally invasive initial diagnostic screen, potentiating classical diagnostic approaches.

Keywords: Autoantibody; Biomarker screening; Brain tumors; Diagnosis; Gliomas; Prognosis; Protein microarrays.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Autoantibodies / blood*
  • Biomarkers, Tumor / blood*
  • Brain Neoplasms / blood
  • Brain Neoplasms / diagnosis*
  • High-Throughput Screening Assays*
  • Humans
  • Prognosis
  • Protein Array Analysis*

Substances

  • Autoantibodies
  • Biomarkers, Tumor