Genome-Wide Screening Identifies Prognostic Long Noncoding RNAs in Hepatocellular Carcinoma

Biomed Res Int. 2021 May 20:2021:6640652. doi: 10.1155/2021/6640652. eCollection 2021.

Abstract

Hepatocellular carcinoma (HCC) is a common malignancy with a poor prognosis. Therefore, there is an urgent call for the investigation of novel biomarkers in HCC. In the present study, we identified 6 upregulated lncRNAs in HCC, including LINC01134, RHPN1-AS1, NRAV, CMB9-22P13.1, MKLN1-AS, and MAPKAPK5-AS1. Higher expression of these lncRNAs was correlated to a more advanced cancer stage and a poorer prognosis in HCC patients. Enrichment analysis revealed that these lncRNAs played a crucial role in HCC progression, possibly through a series of cancer-related biological processes, such as cell cycle, DNA replication, histone acetyltransferase complex, fatty acid oxidation, and lipid modification. Moreover, competing endogenous RNA (ceRNA) network analysis revealed that these lncRNAs could bind to certain miRNAs to promote HCC progression. Loss-of-function assays indicated that silencing of RHPN1-AS1 significantly suppressed HCC proliferation and migration. Though further validations are still needed, these identified lncRNAs could serve as valuable potential biomarkers for HCC prognosis.

Publication types

  • Retracted Publication

MeSH terms

  • Biomarkers, Tumor
  • Carcinoma, Hepatocellular / genetics*
  • Carcinoma, Hepatocellular / pathology
  • Cell Adhesion Molecules / genetics
  • Cell Cycle / genetics
  • Cell Line, Tumor
  • Cell Movement / genetics
  • Cell Proliferation / genetics
  • China
  • Databases, Genetic
  • Disease Progression
  • Female
  • Gene Expression Regulation, Neoplastic / genetics
  • Genome-Wide Association Study
  • Humans
  • Intracellular Signaling Peptides and Proteins / genetics
  • Liver / pathology
  • Liver Neoplasms / genetics
  • Male
  • MicroRNAs / genetics
  • Prognosis
  • Protein Serine-Threonine Kinases / genetics
  • RNA, Antisense / genetics
  • RNA, Long Noncoding / genetics*
  • RNA, Long Noncoding / metabolism

Substances

  • Biomarkers, Tumor
  • Cell Adhesion Molecules
  • Intracellular Signaling Peptides and Proteins
  • MKLN1 protein, human
  • MicroRNAs
  • RNA, Antisense
  • RNA, Long Noncoding
  • long noncoding RNA RHPN1-AS1, human
  • MAP-kinase-activated kinase 5
  • Protein Serine-Threonine Kinases