Generation and Characterization of a CRISPR/Cas9-Mediated SNAP29 Knockout in Human Fibroblasts

Int J Mol Sci. 2021 May 18;22(10):5293. doi: 10.3390/ijms22105293.

Abstract

Loss-of-function mutations in the synaptosomal-associated protein 29 (SNAP29) lead to the rare autosomal recessive neurocutaneous cerebral dysgenesis, neuropathy, ichthyosis, and keratoderma (CEDNIK) syndrome. SNAP29 is a soluble N-ethylmaleimide-sensitive factor attachment protein receptor (SNARE) protein. So far, it has been shown to be involved in membrane fusion, epidermal differentiation, formation of primary cilia, and autophagy. Recently, we reported the successful generation of two mouse models for the human CEDNIK syndrome. The aim of this investigation was the generation of a CRISPR/Cas9-mediated SNAP29 knockout (KO) in an immortalized human cell line to further investigate the role of SNAP29 in cellular homeostasis and signaling in humans independently of animal models. Comparison of different methods of delivery for CRISPR/Cas9 plasmids into the cell revealed that lentiviral transduction is more efficient than transfection methods. Here, we reported to the best of our knowledge the first successful generation of a CRISPR/Cas9-mediated SNAP29 KO in immortalized human MRC5Vi fibroblasts (c.169_196delinsTTCGT) via lentiviral transduction.

Keywords: CEDNIK syndrome; CRISPR/Cas9; SNAP29; ichthyosis; lentiviral transduction.

MeSH terms

  • Animals
  • Autophagy / genetics
  • CRISPR-Cas Systems / genetics
  • Cell Differentiation / genetics
  • Cell Line
  • Fibroblasts / metabolism*
  • Fibroblasts / physiology
  • Gene Knockout Techniques / methods*
  • Humans
  • Keratoderma, Palmoplantar / genetics
  • Membrane Fusion / genetics
  • Mutation / genetics
  • Neurocutaneous Syndromes / genetics
  • Qb-SNARE Proteins / genetics*
  • Qb-SNARE Proteins / metabolism
  • Qc-SNARE Proteins / genetics*
  • Qc-SNARE Proteins / metabolism
  • SNARE Proteins / genetics
  • SNARE Proteins / metabolism

Substances

  • Qb-SNARE Proteins
  • Qc-SNARE Proteins
  • SNAP29 protein, human
  • SNARE Proteins

Supplementary concepts

  • Cerebral dysgenesis, neuropathy, ichthyosis, and palmoplantar keratoderma syndrome