Epidemiology of enteric virus infections in children living in the Amazon region

Int J Infect Dis. 2021 Jul:108:494-502. doi: 10.1016/j.ijid.2021.05.060. Epub 2021 May 28.

Abstract

Objectives: To verify the frequency of viruses causing acute gastroenteritis (AGE) in association with the histo-blood group antigen (HBGA) and Rotarix™ vaccination coverage in children from the Amazon region.

Design: Fecal and saliva samples were collected from children with AGE (n = 485) and acute respiratory infection (ARI) (n = 249) clinical symptoms. Rotavirus A (RVA), norovirus, human adenovirus (HAdV), and sapovirus (SaV) were verified in feces by molecular detection. Saliva samples were used for HBGA phenotyping/FUT3 genotyping. Blood group types, clinical aspects and Rotarix™ RVA vaccination data were recorded.

Results: Norovirus remained the most prevalently detected cause of AGE (38%, 184/485 and ARI 21.3%, 53/249). High HAdV frequencies were observed in AGE children (28.6%, 139/485) and ARI children (37.3%, 93/249). RVA was the third most prevalent virus causing AGE (22.7%, 110/485 and ARI 19.3%, 48/249) and a low RV1 coverage (61%, 448/734) was verified. The SaV frequencies were lower (7.2%, 35/485 for AGE and 6.8%, 17/249 for ARI). Secretor children were HBGA susceptible to HAdV infection (OR 1.5, 95% CI 1.0-2.3; P = 0.04) but not to RVA, norovirus or SaV infection.

Conclusions: Norovirus could be considered the main etiological agent of AGE. No association was verified for HBGA susceptibility to RVA, norovirus and SaV. Secretor children showed a slight susceptibility to HAdV infection and the Le (a-b-) heterogeneous SNPs on the FUT3 gene.

Keywords: Amazon; Histo-blood group antigens; Human adenovirus; Norovirus; Rotavirus A; Sapovirus.

MeSH terms

  • Acute Disease
  • Adenovirus Infections, Human / epidemiology
  • Adenovirus Infections, Human / virology
  • Adenoviruses, Human / isolation & purification
  • Blood Group Antigens / analysis
  • Caliciviridae Infections / epidemiology
  • Caliciviridae Infections / virology
  • Child, Preschool
  • Feces / virology
  • Female
  • Fucosyltransferases / genetics
  • Gastroenteritis / epidemiology
  • Gastroenteritis / genetics
  • Gastroenteritis / virology*
  • Genotype
  • Humans
  • Infant
  • Male
  • Norovirus / isolation & purification
  • Polymorphism, Single Nucleotide
  • Respiratory Tract Infections / virology
  • Rotavirus / isolation & purification
  • Rotavirus Infections / epidemiology
  • Rotavirus Infections / virology
  • Rotavirus Vaccines
  • Saliva
  • Sapovirus / isolation & purification
  • South America / epidemiology
  • Vaccines, Attenuated
  • Virus Diseases / epidemiology*

Substances

  • Blood Group Antigens
  • RIX4414 vaccine
  • Rotavirus Vaccines
  • Vaccines, Attenuated
  • Fucosyltransferases
  • 3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase