Modular barcode beads for microfluidic single cell genomics

Sci Rep. 2021 May 25;11(1):10857. doi: 10.1038/s41598-021-90255-x.

Abstract

Barcode beads allow efficient nucleic acid tagging in single cell genomics. Current barcode designs, however, are fabricated with a particular application in mind. Repurposing to novel targets, or altering to add additional targets as information is obtained is possible but the result is suboptimal. Here, we describe a modular framework that simplifies generation of multifunctional beads and allows their easy extension to new targets.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Biomarkers, Tumor
  • DNA Barcoding, Taxonomic
  • Gene Expression Profiling
  • Gene Expression Regulation, Neoplastic
  • Genomics / methods*
  • Humans
  • Microfluidics / methods*
  • Neoplasms / etiology
  • Single-Cell Analysis / methods*
  • Transcriptome

Substances

  • Biomarkers, Tumor