A eutherian-specific microRNA controls the translation of Satb2 in a model of cortical differentiation

Stem Cell Reports. 2021 Jun 8;16(6):1496-1509. doi: 10.1016/j.stemcr.2021.04.020. Epub 2021 May 20.

Abstract

Cerebral cortical development is controlled by key transcription factors that specify the neuronal identities in the different layers. The mechanisms controlling their expression in distinct cells are only partially known. We investigated the expression and stability of Tbr1, Bcl11b, Fezf2, Satb2, and Cux1 mRNAs in single developing mouse cortical cells. We observe that Satb2 mRNA appears much earlier than its protein and in a set of cells broader than expected, suggesting an initial inhibition of its translation, subsequently released during development. Mechanistically, Satb2 3'UTR modulates protein translation of GFP reporters during mouse corticogenesis. We select miR-541, a eutherian-specific miRNA, and miR-92a/b as the best candidates responsible for SATB2 inhibition, being strongly expressed in early and reduced in late progenitor cells. Their inactivation triggers robust and premature SATB2 translation in both mouse and human cortical cells. Our findings indicate RNA interference as a major mechanism in timing cortical cell identities.

Keywords: SATB2; cell fate; cell identity; corpus callosum; cortex; cortical layering; developmental timing; in vitro corticogenesis; mammalian evolution; miR-catch; microRNA; neural stem cells; post-transcriptional control.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 3' Untranslated Regions
  • Animals
  • Cell Differentiation
  • Cell Line
  • Cerebral Cortex / metabolism*
  • Eutheria / genetics*
  • Eutheria / metabolism*
  • Gene Expression Regulation, Developmental
  • Humans
  • Matrix Attachment Region Binding Proteins / metabolism*
  • Mice
  • MicroRNAs / metabolism*
  • Neurogenesis
  • Repressor Proteins / metabolism*
  • Transcription Factors / metabolism*
  • Tumor Suppressor Proteins / metabolism*

Substances

  • 3' Untranslated Regions
  • Bcl11b protein, mouse
  • MIRN541 microRNA, mouse
  • MIRN92 microRNA, human
  • Matrix Attachment Region Binding Proteins
  • MicroRNAs
  • Repressor Proteins
  • SATB2 protein, mouse
  • Transcription Factors
  • Tumor Suppressor Proteins