Electrostatic modulation of hnRNPA1 low-complexity domain liquid-liquid phase separation and aggregation

Protein Sci. 2021 Jul;30(7):1408-1417. doi: 10.1002/pro.4108. Epub 2021 May 22.

Abstract

Membrane-less organelles and RNP granules are enriched in RNA and RNA-binding proteins containing disordered regions. Heterogeneous nuclear ribonucleoprotein A1 (hnRNPA1), a key regulating protein in RNA metabolism, localizes to cytoplasmic RNP granules including stress granules. Dysfunctional nuclear-cytoplasmic transport and dynamic phase separation of hnRNPA1 leads to abnormal amyloid aggregation and neurodegeneration. The intrinsically disordered C-terminal domain (CTD) of hnRNPA1 mediates both dynamic liquid-liquid phase separation (LLPS) and aggregation. While cellular phase separation drives the formation of membrane-less organelles, aggregation within phase-separated compartments has been linked to neurodegenerative diseases. To understand some of the underlying mechanisms behind protein phase separation and LLPS-mediated aggregation, we studied LLPS of hnRNPA1 CTD in conditions that probe protein electrostatics, modulated specifically by varying pH conditions, and protein, salt and RNA concentrations. In the conditions investigated, we observed LLPS to be favored in acidic conditions, and by high protein, salt and RNA concentrations. We also observed that conditions that favor LLPS also enhance protein aggregation and fibrillation, which suggests an aggregation pathway that is LLPS-mediated. The results reported here also suggest that LLPS can play a direct role in facilitating protein aggregation, and that changes in cellular environment that affect protein electrostatics can contribute to the pathological aggregation exhibited in neurodegeneration.

Keywords: ALS; LLPS; hnRNPA1; intrinsically disordered protein; neurodegenerative diseases; protein aggregation.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Heterogeneous Nuclear Ribonucleoprotein A1 / chemistry*
  • Humans
  • Intrinsically Disordered Proteins / chemistry*
  • Protein Aggregates*
  • Protein Domains
  • Static Electricity

Substances

  • Heterogeneous Nuclear Ribonucleoprotein A1
  • Intrinsically Disordered Proteins
  • Protein Aggregates
  • hnRNPA1 protein, human