Efficient electrotransformation of Rhodococcus ruber YYL with abundant extracellular polymeric substances via a cell wall-weakening strategy

FEMS Microbiol Lett. 2021 May 17;368(9):fnab049. doi: 10.1093/femsle/fnab049.

Abstract

Rhodococcus spp. have broad potential applications related to the degradation of organic contaminants and the transformation or synthesis of useful compounds. However, some Gram-positive bacteria are difficult to manipulate genetically due to low transformation efficiency. In this study, we investigated the effects of chemicals including glycine, isonicotinic acid hydrazide (INH), Tween 80 and penicillin G, as well as cell growth status, competent cell concentration, electroporation field strength, electroporation time and heat shock time, on the electrotransformation efficiency of the tetrahydrofuran-degrading bacterium Rhodococcus ruber YYL with low transformation efficiency. The highest electrotransformation efficiency was 1.60 × 106 CFU/µg DNA after parameter optimization. GmhD (D-glycero-D-manno-heptose 1-phosphate guanosyltransferase) gene, which is important in the biosynthesis of lipopolysaccharide, was deleted via the optimized electrotransformation method. Compared with wild-type strain, YYL ΔgmhD showed extremely high electrotransformation efficiency because the surface of it had no mushroom-like extracellular polymeric substances (EPS). In addition, the results showed that cell wall-weakening reagents might cause some translucent substances like EPS, to detach from the cells, increasing the electrotransformation efficiency of strain YYL. We propose that these results could provide a new strategy for unique bacteria that are rich in EPS, for which genetic manipulation systems are difficult to establish.

Keywords: Rhodococcus ruber YYL; electrotransformation; extracellular polymeric substances; gene knockout.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Wall
  • DNA, Bacterial / genetics
  • Electroporation / methods*
  • Extracellular Polymeric Substance Matrix
  • Glycine / pharmacology
  • Isoniazid / pharmacology
  • Penicillin G / pharmacology
  • Polysorbates / pharmacology
  • Rhodococcus / drug effects
  • Rhodococcus / genetics*
  • Rhodococcus / growth & development
  • Rhodococcus / metabolism*
  • Transformation, Bacterial

Substances

  • DNA, Bacterial
  • Polysorbates
  • Penicillin G
  • Glycine
  • Isoniazid

Supplementary concepts

  • Rhodococcus ruber