Identification of genes involved in neuronal cell death and recovery over time in rat axotomy and neurorrhaphy models through RNA sequencing

Mol Cell Neurosci. 2021 Jun:113:103628. doi: 10.1016/j.mcn.2021.103628. Epub 2021 May 5.

Abstract

Facial nerves are frequently injured during cosmetic or other types of facial surgery. However, information on the genes involved in the damage and recovery of the facial nerves is limited. Here, we aimed to identify the genes affected by facial nerve injury and repair using next-generation sequencing. We established a rat axotomy model and a parallel epineurial neurorrhaphy model, in which gene expression was analyzed from 3 days to 8 weeks after surgery. We discovered that ARRB1, SGK1, and GSK3B genes associated with neuronal cell death were upregulated in the axotomy model. In contrast, MFRP, MDK, and ACE genes involved in neural recovery and regeneration exhibited higher expression in the neurorrhaphy model. In the present study, the analysis of the big data obtained from the next-generation sequencing (RNA-seq) technology reveals that the expression of genes involved in neuronal cell death is induced during nerve damage, and those associated with neural recovery are more abundantly expressed during repair processes. These results are considered to be useful for the establishment of the treatment of related diseases and basic research in various neuroscience fields by utilizing damage and recovery mechanism of facial nerves.

Keywords: Axotomy; Epineurial neurorrhaphy; Facial nerves; Neural regeneration; Neuronal cell death; Next-generation sequencing.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Death
  • Facial Nerve Injuries / genetics*
  • Facial Nerve Injuries / metabolism
  • Glycogen Synthase Kinase 3 beta / genetics
  • Glycogen Synthase Kinase 3 beta / metabolism
  • Immediate-Early Proteins / genetics
  • Immediate-Early Proteins / metabolism
  • Male
  • Midkine / genetics
  • Midkine / metabolism
  • Nerve Regeneration / genetics*
  • Neurons / metabolism*
  • Neurons / physiology
  • Peptidyl-Dipeptidase A / genetics
  • Peptidyl-Dipeptidase A / metabolism
  • Protein Serine-Threonine Kinases / genetics
  • Protein Serine-Threonine Kinases / metabolism
  • Rats
  • Transcriptome*
  • beta-Arrestin 1 / genetics
  • beta-Arrestin 1 / metabolism

Substances

  • Arrb1 protein, rat
  • Immediate-Early Proteins
  • Mdk protein, rat
  • beta-Arrestin 1
  • Midkine
  • Glycogen Synthase Kinase 3 beta
  • Gsk3b protein, rat
  • Protein Serine-Threonine Kinases
  • serum-glucocorticoid regulated kinase
  • Peptidyl-Dipeptidase A