Identification of an immune signature to predict poor clinical outcome in cervical cancer

Epigenomics. 2021 Jun;13(11):891-907. doi: 10.2217/epi-2020-0437. Epub 2021 May 6.

Abstract

Aim: To explore tumor immune microenvironment and identify immune prognostic-related circRNAs in cervical cancer. Materials & methods: RNA-seq in combination with bioinformatics were performed to establish a prognostic risk model and a circRNAs-miRNAs-CXCL8 network. Results: High-risk group correlated with poor survival outcome, and had lower PD-1 immunogenicity. Additionally, CXCL8 could distinguish normal tissue, low- and high-risk tumor tissues, the expression of which showed an increasing trend among the three groups. RNA-seq and bioinformatics indicated that circRNAs like hsa_circ_0025721 might upregulate CXCL8 through sponging miRNAs including hsa-miR-4428. Conclusion: We constructed an immune risk model related with CD8 T cells to predict the cervical cancer patients' prognosis and explored the abnormal expression mechanism of CXCL8 through the ceRNA mechanism.

Keywords: cervical cancer; circRNAs; competing endogenous RNAs; immune-related prognostic biomarkers; tumor immune microenvironment.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biomarkers, Tumor*
  • Computational Biology / methods
  • Female
  • Gene Expression Profiling / methods
  • Gene Expression Regulation, Neoplastic
  • Gene Ontology
  • Gene Regulatory Networks
  • Humans
  • Immune Checkpoint Proteins / genetics
  • Immune Checkpoint Proteins / metabolism
  • Immunophenotyping
  • Lymphocytes, Tumor-Infiltrating / immunology
  • Lymphocytes, Tumor-Infiltrating / metabolism
  • Lymphocytes, Tumor-Infiltrating / pathology
  • MicroRNAs
  • Prognosis
  • RNA, Circular
  • RNA, Messenger
  • ROC Curve
  • Reproducibility of Results
  • Transcriptome
  • Tumor Microenvironment / genetics*
  • Tumor Microenvironment / immunology*
  • Uterine Cervical Neoplasms / diagnosis
  • Uterine Cervical Neoplasms / etiology*
  • Uterine Cervical Neoplasms / metabolism
  • Uterine Cervical Neoplasms / mortality*

Substances

  • Biomarkers, Tumor
  • Immune Checkpoint Proteins
  • MicroRNAs
  • RNA, Circular
  • RNA, Messenger