Genomic Tackling of Human Satellite DNA: Breaking Barriers through Time

Int J Mol Sci. 2021 Apr 29;22(9):4707. doi: 10.3390/ijms22094707.

Abstract

(Peri)centromeric repetitive sequences and, more specifically, satellite DNA (satDNA) sequences, constitute a major human genomic component. SatDNA sequences can vary on a large number of features, including nucleotide composition, complexity, and abundance. Several satDNA families have been identified and characterized in the human genome through time, albeit at different speeds. Human satDNA families present a high degree of sub-variability, leading to the definition of various subfamilies with different organization and clustered localization. Evolution of satDNA analysis has enabled the progressive characterization of satDNA features. Despite recent advances in the sequencing of centromeric arrays, comprehensive genomic studies to assess their variability are still required to provide accurate and proportional representation of satDNA (peri)centromeric/acrocentric short arm sequences. Approaches combining multiple techniques have been successfully applied and seem to be the path to follow for generating integrated knowledge in the promising field of human satDNA biology.

Keywords: genomics; satellite DNA characterization; satellite DNA families; technique interdependency; variability.

Publication types

  • Review

MeSH terms

  • DNA, Satellite / chemistry
  • DNA, Satellite / genetics*
  • Evolution, Molecular
  • Genome, Human
  • Genomics / methods
  • Genomics / trends
  • Humans
  • Sequence Analysis, DNA / methods
  • Sequence Analysis, DNA / trends
  • Time Factors

Substances

  • DNA, Satellite