Long noncoding RNA MIR4435-2HG enhances metabolic function of myeloid dendritic cells from HIV-1 elite controllers

J Clin Invest. 2021 May 3;131(9):e146136. doi: 10.1172/JCI146136.

Abstract

Restriction of HIV-1 replication in elite controllers (ECs) is frequently attributed to T cell-mediated immune responses, while the specific contribution of innate immune cells is less clear. Here, we demonstrate an upregulation of the host long noncoding RNA (lncRNA) MIR4435-2HG in primary myeloid dendritic cells (mDCs) from ECs. Elevated expression of this lncRNA in mDCs was associated with a distinct immunometabolic profile, characterized by increased oxidative phosphorylation and glycolysis activities in response to TLR3 stimulation. Using functional assays, we show that MIR4435-2HG directly influenced the metabolic state of mDCs, likely through epigenetic mechanisms involving H3K27ac enrichment at an intronic enhancer in the RPTOR gene locus, the main component of the mammalian target of rapamycin complex 1 (mTORC1). Together, these results suggest a role of MIR4435-2HG for enhancing immunometabolic activities of mDCs in ECs through targeted epigenetic modifications of a member of the mTOR signaling pathway.

Keywords: AIDS/HIV; Dendritic cells; Immunology; Innate immunity; Noncoding RNAs.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Dendritic Cells* / immunology
  • Dendritic Cells* / metabolism
  • Epigenesis, Genetic / immunology
  • Female
  • Glycolysis / immunology
  • HIV Infections* / immunology
  • HIV Infections* / metabolism
  • HIV-1* / immunology
  • HIV-1* / metabolism
  • Humans
  • Male
  • Mechanistic Target of Rapamycin Complex 1 / immunology
  • Mechanistic Target of Rapamycin Complex 1 / metabolism
  • MicroRNAs* / immunology
  • MicroRNAs* / metabolism
  • Myeloid Cells* / immunology
  • Myeloid Cells* / metabolism
  • Oxidative Phosphorylation
  • RNA, Long Noncoding* / immunology
  • RNA, Long Noncoding* / metabolism
  • Regulatory-Associated Protein of mTOR / immunology
  • Regulatory-Associated Protein of mTOR / metabolism
  • Signal Transduction / immunology

Substances

  • MicroRNAs
  • RNA, Long Noncoding
  • RPTOR protein, human
  • Regulatory-Associated Protein of mTOR
  • Mechanistic Target of Rapamycin Complex 1