Identification and Expression Analysis of SLAC/ SLAH Gene Family in Brassica napus L

Int J Mol Sci. 2021 Apr 28;22(9):4671. doi: 10.3390/ijms22094671.

Abstract

Slow type anion channels (SLAC/SLAHs) play important roles during anion transport, growth and development, abiotic stress responses and hormone responses in plants. However, there is few report on SLAC/SLAHs in rapeseed (Brassica napus). Genome-wide identification and expression analysis of SLAC/SLAH gene family members were performed in B. napus. A total of 23 SLAC/SLAH genes were identified in B. napus. Based on the structural characteristics and phylogenetic analysis of these members, the SLAC/SLAHs could be classified into three main groups. Transcriptome data demonstrated that BnSLAH3 genes were detected in various tissues of the rapeseed and could be up-regulated by low nitrate treatment in roots. BnSLAC/SLAHs were exclusively localized on the plasma membrane in transient expression of tobacco leaves. These results will increase our understanding of the evolution and expression of the SLAC/SLAHs and provide evidence for further research of biological functions of candidates in B. napus.

Keywords: Brassica napus; SLAC/SLAH; abiotic stress; expression analysis; nitrate.

MeSH terms

  • Brassica napus / genetics*
  • Brassica napus / metabolism*
  • Gene Expression
  • Gene Expression Profiling
  • Gene Expression Regulation, Plant
  • Genes, Plant
  • Ion Channels / biosynthesis
  • Ion Channels / genetics
  • Ion Channels / metabolism
  • Nitrates / metabolism
  • Phylogeny
  • Plant Proteins / biosynthesis
  • Plant Proteins / genetics
  • Plant Roots / metabolism
  • Stress, Physiological
  • Transcriptome
  • Voltage-Dependent Anion Channels / biosynthesis
  • Voltage-Dependent Anion Channels / genetics*
  • Voltage-Dependent Anion Channels / metabolism*

Substances

  • Ion Channels
  • Nitrates
  • Plant Proteins
  • Voltage-Dependent Anion Channels