The RNA helicase DDX5 promotes viral infection via regulating N6-methyladenosine levels on the DHX58 and NFκB transcripts to dampen antiviral innate immunity

PLoS Pathog. 2021 Apr 28;17(4):e1009530. doi: 10.1371/journal.ppat.1009530. eCollection 2021 Apr.

Abstract

Multi-functional DEAD-box helicase 5 (DDX5), which is important in transcriptional regulation, is hijacked by diverse viruses to facilitate viral replication. However, its regulatory effect in antiviral innate immunity remains unclear. We found that DDX5 interacts with the N6-methyladenosine (m6A) writer METTL3 to regulate methylation of mRNA through affecting the m6A writer METTL3-METTL14 heterodimer complex. Meanwhile, DDX5 promoted the m6A modification and nuclear export of transcripts DHX58, p65, and IKKγ by binding conserved UGCUGCAG element in innate response after viral infection. Stable IKKγ and p65 transcripts underwent YTHDF2-dependent mRNA decay, whereas DHX58 translation was promoted, resulting in inhibited antiviral innate response by DDX5 via blocking the p65 pathway and activating the DHX58-TBK1 pathway after infection with RNA virus. Furthermore, we found that DDX5 suppresses antiviral innate immunity in vivo. Our findings reveal that DDX5 serves as a negative regulator of innate immunity by promoting RNA methylation of antiviral transcripts and consequently facilitating viral propagation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine / analogs & derivatives*
  • Adenosine / metabolism
  • Animals
  • Cells, Cultured
  • Chick Embryo
  • Cricetinae
  • DEAD-box RNA Helicases / genetics
  • DEAD-box RNA Helicases / physiology*
  • HEK293 Cells
  • Humans
  • Immune Evasion / genetics*
  • Immunity, Innate / genetics
  • Mice
  • Mice, Inbred C57BL
  • NF-kappa B / genetics
  • NF-kappa B / metabolism
  • RNA Helicases / genetics
  • RNA Helicases / metabolism
  • RNA Stability / genetics*
  • RNA, Messenger / metabolism
  • Virus Diseases* / genetics
  • Virus Diseases* / immunology
  • Virus Diseases* / metabolism
  • Virus Replication / genetics

Substances

  • NF-kappa B
  • RNA, Messenger
  • N-methyladenosine
  • DHX58 protein, human
  • Ddx5 protein, human
  • DEAD-box RNA Helicases
  • RNA Helicases
  • Adenosine

Grants and funding

This work was supported by the grants from the National Natural Science Foundation of China (http://www.nsfc.gov.cn/) (31702241) to JX, (31672588 and 31761133003) to YQL, (31902245) to BJ, funding from the Special Program on Science and Technology Innovation Capacity Building of BAAFS (http://www.baafs.net.cn/index)(KJCX201914) to YQL and funding from the Beijing Innovation Team of Technology Systems in the Dairy Industry (http://nyncj.beijing.gov.cn/) (BAIC06-2021) to YQL. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.