Lower elevations are generally thought to contain a greater abundance and diversity of insect communities and their natural enemies than higher elevations. It is less clear, however, how changes in seasons influence this pattern. We conducted a 2-year study (2013‒2014) in guava orchards located in a tropical Andean forest of Peru to investigate differences in fruit flies (Diptera: Tephritidae) and their parasitoid communities at two elevations and over two seasons. Fruit fly traps were installed, monitored, and guava fruits were sampled from eight orchards at low (800-950 m above sea level) and high (1,700-1,900 m above sea level) elevations and during the dry and rainy seasons. At each orchard, adult fruit fly trap captures and emergence of fruit flies and their parasitoids from guava fruit were quantified to determine their abundance and species composition. There was a greater abundance and species richness of fruit flies captured in traps at lower elevations, as well as higher abundance and species evenness of fruit flies that emerged from fruit, indicating that lower elevations are associated with larger fruit fly populations. The abundance, species richness and diversity of parasitoids were also greater at lower elevations. Consequently, guava fruit infestation and fruit fly parasitism rates were also greater at lower elevations. Seasonality also influenced fruit fly populations with a greater number of flies emerging from guava fruit and more fruit infested in the rainy season. However, seasonality had no effect on parasitoid population parameters or rate of parasitism, nor did it interact with elevation as an influence of populations of fruit flies or their parasitoids in guava orchards. This study highlights the importance of examining both elevation and seasonality for a better understanding of the population dynamics of fruit flies and their parasitoids in tropical agroecosystems.