Hepatitis C virus infection restricts human LINE-1 retrotransposition in hepatoma cells

PLoS Pathog. 2021 Apr 19;17(4):e1009496. doi: 10.1371/journal.ppat.1009496. eCollection 2021 Apr.

Abstract

LINE-1 (L1) retrotransposons are autonomous transposable elements that can affect gene expression and genome integrity. Potential consequences of exogenous viral infections for L1 activity have not been studied to date. Here, we report that hepatitis C virus (HCV) infection causes a significant increase of endogenous L1-encoded ORF1 protein (L1ORF1p) levels and translocation of L1ORF1p to HCV assembly sites at lipid droplets. HCV replication interferes with retrotransposition of engineered L1 reporter elements, which correlates with HCV RNA-induced formation of stress granules and can be partially rescued by knockdown of the stress granule protein G3BP1. Upon HCV infection, L1ORF1p localizes to stress granules, associates with HCV core in an RNA-dependent manner and translocates to lipid droplets. While HCV infection has a negative effect on L1 mobilization, L1ORF1p neither restricts nor promotes HCV infection. In summary, our data demonstrate that HCV infection causes an increase of endogenous L1 protein levels and that the observed restriction of retrotransposition of engineered L1 reporter elements is caused by sequestration of L1ORF1p in HCV-induced stress granules.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Carcinoma, Hepatocellular / virology*
  • Cell Line, Tumor
  • Cytoplasmic Granules / virology
  • DNA Helicases / genetics
  • DNA Helicases / metabolism*
  • Hepacivirus / physiology*
  • Hepatitis C / virology*
  • Humans
  • Lipid Droplets / virology
  • Liver Neoplasms / virology*
  • Long Interspersed Nucleotide Elements / genetics*
  • Poly-ADP-Ribose Binding Proteins / genetics
  • Poly-ADP-Ribose Binding Proteins / metabolism*
  • RNA Helicases / genetics
  • RNA Helicases / metabolism*
  • RNA Recognition Motif Proteins / genetics
  • RNA Recognition Motif Proteins / metabolism*
  • Ribonucleoproteins / genetics
  • Ribonucleoproteins / metabolism*

Substances

  • L1 ORF1 protein, human
  • Poly-ADP-Ribose Binding Proteins
  • RNA Recognition Motif Proteins
  • Ribonucleoproteins
  • DNA Helicases
  • G3BP1 protein, human
  • RNA Helicases

Grants and funding

This work was supported by funds from the Deutsche Forschungsgemeinschaft [DFG HE 6889/2 to E.H.], the LOEWE Center DRUID (Novel Drug Targets against Poverty-related and Neglected Tropical Infectious Diseases, E.H.) and the Heinrich Pette Institute, Leibniz Institute for Experimental Virology (E.H.) that is supported by the Free and Hanseatic City of Hamburg and the Federal Ministry of Health. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.