Analysis of the Ligand Recognition Specificities of Human Ficolins Using Surface Plasmon Resonance

Methods Mol Biol. 2021:2227:205-226. doi: 10.1007/978-1-0716-1016-9_19.

Abstract

Ficolins are innate immune recognition proteins involved in activation of the lectin complement pathway. These oligomeric lectin-like proteins are assembled from subunits consisting of a collagen-like triple helix and a trimeric fibrinogen-like recognition domain. In humans, three ficolins coexist: they differ in their ligand binding specificities, but share the capacity to associate with proteases through their collagen-like stalks and trigger complement activation. We describe methods to decipher the recognition specificities of ficolins, based on surface plasmon resonance, an optical technique allowing real-time and label-free monitoring of biomolecular interactions. This technique was mainly used to characterize and compare binding of the three recombinant full-length ficolins and of their isolated recognition domains to various immobilized BSA-glycoconjugates, acetylated BSA or biotinylated heparin. The avidity phenomenon that enhances the apparent affinity of interactions between oligomeric lectin-like proteins and the multivalent ligands is also discussed.

Keywords: Avidity; Ficolins; Molecular interactions; Multivalency; Neoglycoproteins; Recognition specificity; Surface plasmon resonance.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Binding Sites
  • CHO Cells
  • Cells, Cultured
  • Cricetulus
  • Drosophila
  • Ficolins
  • Humans
  • Kinetics
  • Lectins / chemistry*
  • Lectins / metabolism*
  • Lectins / pharmacology
  • Ligands
  • Protein Binding
  • Protein Interaction Domains and Motifs
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / metabolism
  • Recombinant Proteins / pharmacology
  • Substrate Specificity
  • Surface Plasmon Resonance / methods*

Substances

  • Lectins
  • Ligands
  • Recombinant Proteins