Thalassobius aquimarinus sp. nov., isolated from the Sea of Japan seashore

Arch Microbiol. 2021 Aug;203(6):3201-3207. doi: 10.1007/s00203-021-02285-8. Epub 2021 Apr 8.

Abstract

An aerobic, Gram-negative, non-pigmented non-motile bacterium designed КMM 8518T was isolated from a seawater sampled from the Sea of Japan seashore. Strain КMM 8518T grew at 7-42 °C and in the presence of 1-7% NaCl. The phylogenetic analyses based on 16S rRNA gene and whole-genome sequences placed the novel strain КMM 8518T into the genus Thalassobius as a separate lineage. Strain КMM 8518T shared the highest 16S rRNA gene sequence similarity of 98% to Thalassobius gelatinovorus KCTC 22092T and similarity values of ≤ 97% to other recognized Thalassobius species. The average nucleotide identity and digital DNA-DNA hybridization values between strain КMM 8518T and T. gelatinovorus KCTC 22092T were 79.6% and 23.5%, respectively. The major respiratory quinone was ubiquinone-10. The major fatty acid was C18:1ω7c followed by 11-methyl C18:1ω7c. Polar lipids comprised phosphatidylcholine, phosphatidylglycerol, diphosphatidylglycerol, an unidentified aminolipid, an unidentified phospholipid, and three unidentified lipids. The DNA G+C content of 62.7% was calculated from genome sequence analysis. Based on the phylogenetic analyses and distinctive phenotypic characteristics, the marine bacterium КMM 8518T is concluded to represent a novel species of the genus Thalassobius for which the name Thalassobius aquimarinus sp. nov. is proposed. The type strain of the species is strain KMM 8518T (= KCTC 82576T).

Keywords: Marine bacteria; Thalassobius aquimarinus sp. nov..

MeSH terms

  • Fatty Acids* / analysis
  • Japan
  • Oceans and Seas
  • Phospholipids* / analysis
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Rhodobacteraceae* / classification
  • Rhodobacteraceae* / genetics
  • Seawater / microbiology
  • Species Specificity

Substances

  • Fatty Acids
  • Phospholipids
  • RNA, Ribosomal, 16S

Supplementary concepts

  • Thalassobius gelatinovorus