Machine and Deep Learning in Molecular and Genetic Aspects of Sleep Research

Neurotherapeutics. 2021 Jan;18(1):228-243. doi: 10.1007/s13311-021-01014-9. Epub 2021 Apr 7.

Abstract

Epidemiological sleep research strives to identify the interactions and causal mechanisms by which sleep affects human health, and to design intervention strategies for improving sleep throughout the lifespan. These goals can be advanced by further focusing on the environmental and genetic etiology of sleep disorders, and by development of risk stratification algorithms, to identify people who are at risk or are affected by, sleep disorders. These studies rely on comprehensive sleep-related data which often contains complex multi-dimensional physiological and molecular measurements across multiple timepoints. Thus, sleep research is well-suited for the application of computational approaches that can handle high-dimensional data. Here, we survey recent advances in machine and deep learning together with the availability of large human cohort studies with sleep data that can jointly drive the next breakthroughs in the sleep-research field. We describe sleep-related data types and datasets, and present some of the tasks in the field that can be targets for algorithmic approaches, as well as the challenges and opportunities in pursuing them.

Keywords: Deep Learning; Epidemiology; Genomics; Machine learning; Sleep.

Publication types

  • Review

MeSH terms

  • Deep Learning*
  • Humans
  • Machine Learning*
  • Sleep / genetics*
  • Sleep Wake Disorders / genetics*