Characterization of a Glyphosate-Tolerant Enzyme from Streptomyces svecius: A Distinct Class of 5-Enolpyruvylshikimate-3-phosphate Synthases

J Agric Food Chem. 2021 May 5;69(17):5096-5104. doi: 10.1021/acs.jafc.1c00439. Epub 2021 Apr 7.

Abstract

Natural and modified versions of the 5-enolpyruvylshikimate-3-phosphate synthase (epsps) gene have been used to confer tolerance to the broad-spectrum herbicide glyphosate in a variety of commercial crops. The most widely utilized trait was obtained from the Agrobacterium tumefaciens strain CP4 and has been commercialized in several glyphosate-tolerant crops. The EPSPS gene products are enzymes that have been divided into three classes based on sequence similarity, sensitivity to glyphosate, and steady-state catalytic parameters. Herein, we describe the informatics-guided identification and biochemical and structural characterization of a novel EPSPS from Streptomyces sviceus (DGT-28 EPSPS). The data suggest DGT-28 EPSPS and other closely related homologues exemplify a distinct new class (Class IV) of EPSPS enzymes that display intrinsic tolerance to high concentrations of glyphosate (Ki ≥ 5000 μM). We further demonstrate that dgt-28 epsps, when transformed into stable plants, provides robust (≥4× field rates) vegetative/reproductive herbicide tolerance and has utility in weed-control systems comparable to that of commercialized events.

Keywords: EPSPS; X-ray crystallography; enzyme kinetics; glyphosate; herbicide tolerance; shikimate pathway.

MeSH terms

  • 3-Phosphoshikimate 1-Carboxyvinyltransferase / genetics
  • Glycine / analogs & derivatives
  • Glycine / pharmacology
  • Glyphosate
  • Herbicide Resistance / genetics
  • Herbicides* / pharmacology
  • Streptomyces* / genetics

Substances

  • Herbicides
  • 3-Phosphoshikimate 1-Carboxyvinyltransferase
  • Glycine

Supplementary concepts

  • Streptomyces sviceus